Linux (Native) Installation - Bacalyze

Follow the steps below to install Bacalyze on Linux natively:

1. Install all the dependencies mentioned here.
2. Download main.nf from Bacalyze-repository/main/scripts/
3. Install NextFlow. Refer to their documentation here.
4. You can straightaway open a terminal in any directory, refer to the main.nf file and run nextflow run main.nf --<parameters>

If you encounter any issues during installation, please refer to the Linux Requirements page to ensure your system meets the minimum requirements.

Also check whether you have installed everything mentioned here.